CDS
| Accession Number | TCMCG006C14790 |
| gbkey | CDS |
| Protein Id | XP_022561850.1 |
| Location | complement(join(38661594..38661845,38661959..38662159,38662240..38662374,38662465..38662569,38662652..38662843,38662953..38663106,38663269..38663330,38663402..38663548,38663648..38663695,38663798..38663929,38664017..38664163,38664473..38664556,38664632..38664769,38664995..38665095,38665172..38665298,38665516..38665710,38665918..38665962,38666057..38666185,38666271..38666373,38666469..38666698,38666774..38666956,38667137..38667289,38667419..38667514,38667737..38667842,38667941..38668029,38668116..38668253,38668338..38668580,38668684..38668812,38668887..38668934,38669034..38669145,38669204..38669238,38669326..38669434,38669518..38669663,38669792..38669859,38669941..38670013,38670098..38670277,38670544..38670765,38670852..38670946,38671224..38671327,38671432..38671685,38671762..38671884,38671981..38672118,38672239..38672433,38672517..38672711,38672787..38672915,38673006..38673122,38673325..38673649,38673733..38673961,38674029..38674320,38674448..38674546)) |
| Gene | LOC111207780 |
| GeneID | 111207780 |
| Organism | Brassica napus |
Protein
| Length | 2383aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA293435 |
| db_source | XM_022706129.1 |
| Definition | CCR4-NOT transcription complex subunit 1-like isoform X5 [Brassica napus] |
EGGNOG-MAPPER Annotation
| COG_category | K |
| Description | Domain of unknown function (DUF3819) |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko03019 [VIEW IN KEGG] |
| KEGG_ko |
ko:K12604
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway |
ko03018
[VIEW IN KEGG] map03018 [VIEW IN KEGG] |
| GOs | - |
Sequence
| CDS: ATGGTGATGAACCCGTCCAAGGTCGCCGGCCATGCCCGGTTCTTACTCGAGAGCTTTAGCGATTCGGAAGTTGATTCAATCGCCCAAGAGATATGTCAGCTGGTTGAGTATGGTGTTGAGACAAGCATTCCAGTTCTCAAGACATGTTTAGATTGCTTCGCCGCCCGTAGAAGCCATCCTAATTCCTCGCAGCTTGAGAAACTAATATCCTTGGTCTTTAAACGTGTCCTGAAACACTCTAATCTCATTTCTCACGCCCTTCGAGATGTCGAGGTCACTGATGAGTTCGTGGCTGATTTGACTAATGCTCTCGACTTTTCAATCTCTGACAAAATTAGCTTTGCTCTGTCTCTAGCCGAGTTTGACAGCTCCGATGATGCAAACGCAGCTGGTCGAAACTTATTATTGGCCATGATTGAGCAACTGTGTGCCAATTCTGCCCAGATTGAGTCAACCGAGCAAGTTCAGAATATTCTTTTGTTTCTCCAGAATTCTGAGGACCTCTCCACCCATCTTAATTCCTTCTTACATATTTTGTCTTCTACTCTACCCAAAGATGACTTTTCTTTTGCTCTTACTCCTATCCTTTCTCAACAGCTTCACGAAGCTGATGTTTTAAGGTGCATCGATTTTGACACTGAGTTTGATGCTATCTTAGCTGAAATCGACAAGGAAATTTCTGTTGGAGATCTTATGGGAGAATTAGGTTGTGGTGTTACTGCTGATGCACAACTATGCAAAGATATCTTGTCTAGTTTCGCACCATTAACAGAGGCTACTATCTCAAGGATTCTTGCTAACGTTGCTCGTACTTGTGCTGATCTAGAAGATAACCACACCACCTTTTCAACATTTAGTCTGGTCCTTGGTTGCTGCATTCCCACTGAACTTTCCACTCCAATGTCGTGGAGTGTTGACATCTTAACTGAGACAATCACGCAACTTCAGGCTCCTGGCACAAGTTGGAGGAAAGTAATCGAGAATCTTGACCATAGTGGATTTGAGATCCCCAATAAGGAATCTTTCTCGTTTTTCATGCGGCTATATAAAACTGCTTGCAAGGACCCGTTTCCTCTTGATGCTGTATGCGGTTCTGTCTGGAAAAATGTGGAAGGTCAAATATCGTTTCTTAAATATGCAATAGCATCCCCACCAGAAGTATTCACCTTTATGCATTCTCCCAGGAAGCTGGTATATATTGACGATAACATGCACAGCCATGAGCATCAATTAGGACTTTCCAATGAAGCATGGCTATCTCTCGATCTCTTAGATGTCTTATGCCAACTAGCTGAGAGAGGTCATACTGTTTTAGTTAGTTCGCTGCTCCAGTATCCACTCGCACAGTGTCCCAAAACCTTGCTTACTGGAATGACACACATCAAAACTGCCTATAATCTCATTCAGCGAGAGGTTGTTTCTGCTATTCTTCCAGTGATAATTACGAACTCACAGGATAGTGGTTTTATCCTTAATCTTTGGCATCAGAATACTGAGCTTGTTCTGTGGGGGATTTTAAATGCCCAAAATCTTAAAGCAGACCGCATACTCAATTTAATTGATATCTGCCATGAACTGAAGGTTCTTTCTGTTGTTTTAGAATCGGTTCCAATCTCATTCAGCATCAGATTGGCAGTCCTTGCCTCACTGAGAGGCTATTTGGACATCGAGAACTGGTTGCCAAACTTTCTATGTGTGTATAAAGACCTCTTTGCGGAGGAATGTCTCAAGTTTGTCAAAAATGTGCATTTTAGCGAATCAGAGGATTTTACTTCCGAACATTTCCATCCTTCTGATCCGTTATCAGATGTTCATTTGGATGCAACGACTTCGCTTTTGAAAGTTTTGAAAGCTCATGATAATGTGATTACTTCATCTCAACTGGTCGATGAGATAGAAAAGGTCAATGCAGCAATCTTGGATTGTAATTCTAAACTGCAGAATGGTGAGGCTAAAGTTTCATCAGCTTCGAATGCATATGGAGACGATATTGAGGCAGAAGCGAACGCTTATTTCCATCAAATGTTTTCGGGTCAGTTGAGTGTTGATGCAATGGTTCAAATGCTTTCGCGATACAAGGACTCCTCGGTTCAAAGGGAAAAATCAATTTTTGATTGCATGATTGCTAATCTGTTCGAGGAATATCGTTTTTTTCCCAAGTATCCCGAGAGGCAGCTAAAAATAGCCTCCATCCTTTTTGGTTCTGTTATCAAGCACCAGCTTATAAGTTCTCTCACACTTGGGATGGCACTGCGTTTAGTCTTGGATTCTTTGCGTAAACCTGCAGATTCAAAAATGTTTCTGTTTGGAAGCAAAGCTCTGGAACAGTTCGTGAATCGTCTGGTTGAATTACCTCAGTACTGTAACCATATTTTGCAAATATCTCATCTGCGTAGCACTCACCCCGAGTTAGTCACTGTTATTGAACAAGCACTTTCAAGGATATCATCTGGTAATTTAGAATCAGAGGCAGTTTCGAACCCTGGTCCTTCACAGTCTTTCCCAGGAAATGGCGAGTTTAGTGGTTCTGGAATTGGCCAGTCTGCTCTCCAACTTCCTTTACCTGTACAGTCTCAACAGAAAAATGAAGTGCACATTAATGGCAACAGCAGAGTGCCAAGTGTGCCATTTATCGAAGCAAAGACACTTCTGCCCTCTTCATCTACTACTTCCGCTGATGTTTCTGTCATTCCTAAGAATCCTGGTATTTCGACTTCTTCATTAACTTCAGCTGGTTTTGTTCGTCCCGCTCGTGGAGCCACTTCGACGAGGTTTGGGTCTGCTTTGAACATAGAGACCCTGGTTGCAGCAGCAGAGAGAAGGGAAAACGCAATAGAGACTCCACCTTCAGATGTTCAGGACAAAATTTCTTTCATAATCAATAATATCTCTACAGCCAATATTGAATCCAAGGGGAAAGAGTTCGCTGAGATTTTGCCTCAACAGTACTATCCCTGGTTCGCTCAGTATATGGTTATGAAAAGAGCGAGCATCGAACCCAATTTTCATGATTTGTACTTGAAGTTCTTGGACAAAGTTGATTCCAAGCTGTTGTTTAAGGAGATACTTCAAAATACTTACGAAAATTGCAAGGTTCTCTTGGGTTCAGAGCTCATAAAGTCAAGTTCGGAAGAGCGATCTCTGCTCAAAAATTTAGGCAGTTGGCTTGGAAAGTTGACCATTGGAAGGAATTATGTTTTGAGGGCGCGAGAAATTGATCCAAAATCCTTAATTGTGGAGGCATATGAAAAAGGGTTGATGATTGCAGTCATTCCATTTACTTCAAAGGTTCTGGAGCCATGCCAAAACAGTATTGCGTATCAGCCTCCCAATCCTTGGACAATGGCTATACTCGGGTTGCTCGCTGAGATTTATTCAATGCCGAACCTTAAAATGAATCTGAAGTTTGACATAGAGGTTTTATTCAAGAACCTTGGTGTTGATTTGAAGGAAGTAGCGCCGACTTCCCTTCTAAAGGACCGGAAGAGAGAAATAGATGGGAATCCTGATTTTAGCAACAAAGATCTTGGAGTGACACATATATCTCAACCACAGATGATCCAAGAGCCGAAAACAATTTCTCCTCTTAAGCAAATCGACCTACCTCTGGATGTTGCAGATTCACCTAATACAGACGCTTCCTCGAAGTTATTCTCACAGTATGTAGCCCCTCAACGTGTATATACTAATACTTTGATGGAAGACGAAAAAGTTTCCACTTTAGGCTTGTCTGATCAGCTTCCATCACCTCAAGGACTGTTCCCGTCAACTCCATCCCCATTGTTTTCTATTAGCCAGCAGCTGTCAGCAGCACTTCCCAATATTGGAAATCATGTTGTTATTAATCAGAAATTAAGCGGATTTGCTATGCACTTCCCATTTCATAGAGTGGTACCACTTGCCATGGACAGAGCTCTCAAGGAGATTGTGTCTGGTATTGTTCAGCGAAGTGTATGTATTGCTTGCCAAACAACAAAAGAACTTGTGCTGAAGGACTATACCTTGGAACCAGATGAGACACGTATATATAATGCAGCTCACTTGATGGTTGCTAGTCTAGCTGGGAGTTTGGCCCATGTGACGTGCAAGGAACCCCTGCGCACTTCAATATCATGTCATCTACGGAATTCGCTCCAGGGGATGAATATTAAAAATGAAGCTCTTGAACAAATTGTGCAACTTGTCACCAATGACAACCTTGATTTGGGTTGTGCTGCCATTGAACAGGCGGCTACAGAGAAGGCAATACAAACTATTGATGCGGACATTGACCAGCAATTGTTGTTACGGAAAAAGCATAGAGATGGTGCCGGATCCTCCCTTTTTGATCCGAACATGCTATCGCAGAATTCTGTTAGTTTTATACCAGAGTCCCTCCGTCCAAAACCGGGACATCTATCCCTGTCTCAACAGCGAGTTTATGAGGACTTTGTTCAGCTTCCTTGGCAAAAGCAGACAACTCAAACGTCACACGGTTTATCTGCCGCTTCAAGCTCATCTGGCGATGTTGGGCTTAGTAGTAGTTATGGTCCAGCATCAGGTAAAAGTGCTTCGGACTTTTTGTCTAGTGCTGGAAACGCTCGGATGGATAACGTCTCCCGGCCATTGGATATCTCTGTGGAGGGTTTTGAATCTCCTCCAGTTTCACTTTTAAGCTCACAAGTTGATCCAGCTGTTGACACAGCCGGTCTTCAGTTCTCTAAATCCCTTTCGACCTCTGAATTGAGCCTGGTTGAATCCTCTGACACCGCTGTGAAAGAAACTGGAGCATCATTGCAGACTTTGACTTCAGCTGCTACCATGGAGCGTCTTGGTGGAAATAATATTATACAGCCTTCTCTGTCCACGAGAGATGCACTAGAAAAGTATCATATTGTTACACAGAAGATGGAGGACTTAGTGGCTAATATTGCAGGAGATGATGAAATTCAGGCTGTAGTTTCTGAAGTTCCTGAAATCATCCTCAGATGTATAAGCAGAGACGAAGCTGCCTTGGCTGTCGCCCAAAAAGCTTTCAAGGCTCTTTATGACAATGCATCAAGTAACCTTCACGTCAGTGCTAACCTAGCAATTCTTGTGGCTGTTCGAGATGTTTGCAAGCGTGTTGTTAAAGAGCTCACTAGTTGGGTGATTTATTCAGAGGAGGAGCGGAAGCTTAACAAAGACATTACTATCGGTCTTATCCAACGCGAGTTACTTAACCTAGCGGAGTACAATGTCCACATGGCGAAGTATCTTGATGGAGGGAGAAACAAAAGCGCCACTGACTTTTCTATTTCTCTACTCCAATCCTTGGTCACTGAGGAGTCAAGTGTCATTTCAGAGCTACACAGTCTTGTTGATGCACTGGCAAAGCTTTCCTCAAAATCTGGATCTCCCGAGTCATTGCAACAACTAATTGACATCATACGAAATCCAGTTACTAACACAAGTGATCACTCTGATAGCGCAATCGGAATTGAGAACAATGATAAGCAATCAAAGGATAAAAAGGTTGTGTACAATACCACCGCTAACATAGAAGAGAACACCAACTTGGAATTTGTGGAATCAGAGTCTGCGGGTTTCCGGATTCGGGTGTCCACACTTTTTGAAAGCTGGTATCAGATCTGCGAAGTTTCTGGTGCAAATGAAACCGCTTGTTCACAATACGTGTTGCATTTACATGAAACTGGACTACTTAAGGGAGATAATACAACAGAGAGTTTTTTCCGAATTCTTCTGGAACTTTCTGTTGCTCATTGTATATCTTCTGAAGAAATTAGTTCTGGTGCTGTGCAATCTCCTCAGCAAGCTCAGAGTCCATCATTCCTTATCATTGATATTTATGCCAAACTTGTTTTCTCGATCTTGAAGTATCTCCCGGAACAGGAGTCGTGCAGCAAGTTATTTCTTCTGTCGGAGATCATGGCTGTTACTGTGAGATCTATTCAAAAAGATGCAGAAGATAAAAAGACATCACTCAATCCAAGACCTTATTTTAGGTTATTCATCAATTGGCTACTGGACTTATGTTCCTTGGATCCCGGAACTGATGGTGCAAACTTTCAGGTTCTATCAGCTTTTGCCAGTGCATTCCACGCGTTGCAGCCTCTTAAGTTTCCCGCCTTCAGCTTTGCATGGCTAGAACTGGTCAGCCACAGAAGCTTTATGCCCAAGCTACTTACAGTAAATGGCCAGAAAGGTTGGCCATATGTTCAACGCCTGCTGGTAGACTTGCTCCAGTTTCTTGAGCCATTTTTGAGAAATGCCGAACTCGGAGGACCAGTTAATTTCCTATACAAAGGGACACTGAGAGTGTTACTGGTGCTGCTTCATGACTTTCCGGAGTTCCTCTGCGATTATCATTTTACTTTCTGCGACGTGATTCCTTCAAGTTGCATACAAATGCGAAATATTATTCTGAGTTCTTTTCCACGGAACATGAGGCTTCCAGATCCCTCGACCCCAAATTTAAAGATTGATTTGCTGCCGGAGATAGTAGAAGCTCCATGTATCCTTTCTGAGGTTGATGCTGCGCTAAAAGCAAAACAAATGAAGAATGACGTGGACGAGTATCTCGCTTCGAGGCAACAGAATTCTGCATACCTAAGTGAATTGAAGCAGAAGCTACTCCTGTCGTCCAGCGAGGCTAGCTCAGCTGAAACCCGTTACAGTGTACCATTGATCAACTCGCTTGTGCTATATACTGGAATTCAGGCTATCCAGCAGCTACAGGCGGGTGAGACACAGGCTCAAAATGTGGTGGCATTGCACATGTTCAAGTATTTAAGTATGGAACTTGATACGGAAGGGCGGTACCTGTTCCTTAATGCAATCGCCAATCAGCTTCGATATCCCAACAACCACACCCATTACTTCTCCTTCATCATGCTCTATCTCTTCTTCGAGTCTGACCAGGAGATCGTACAGGAGCAGATAACAAGAGTGTTGCTGGAAAGGCTAATTGTGAACAGGCCGCATCCATGGGGACTCCTGATAACATTCATAGAGCTGATAAAGAATCCAAGATATGGCTTCTGGAAACAAGCCTTCATCAGGTGTGCGCCTGAGATTGAGAAACTCTTTGAATCTGTCGCCAGATCCTGTGGTGGTCTCAAGCCCCCTGACGAGGGAATGGTCTCCGGTTGGGTCTCGGACAACTCTCATTAG |
| Protein: MVMNPSKVAGHARFLLESFSDSEVDSIAQEICQLVEYGVETSIPVLKTCLDCFAARRSHPNSSQLEKLISLVFKRVLKHSNLISHALRDVEVTDEFVADLTNALDFSISDKISFALSLAEFDSSDDANAAGRNLLLAMIEQLCANSAQIESTEQVQNILLFLQNSEDLSTHLNSFLHILSSTLPKDDFSFALTPILSQQLHEADVLRCIDFDTEFDAILAEIDKEISVGDLMGELGCGVTADAQLCKDILSSFAPLTEATISRILANVARTCADLEDNHTTFSTFSLVLGCCIPTELSTPMSWSVDILTETITQLQAPGTSWRKVIENLDHSGFEIPNKESFSFFMRLYKTACKDPFPLDAVCGSVWKNVEGQISFLKYAIASPPEVFTFMHSPRKLVYIDDNMHSHEHQLGLSNEAWLSLDLLDVLCQLAERGHTVLVSSLLQYPLAQCPKTLLTGMTHIKTAYNLIQREVVSAILPVIITNSQDSGFILNLWHQNTELVLWGILNAQNLKADRILNLIDICHELKVLSVVLESVPISFSIRLAVLASLRGYLDIENWLPNFLCVYKDLFAEECLKFVKNVHFSESEDFTSEHFHPSDPLSDVHLDATTSLLKVLKAHDNVITSSQLVDEIEKVNAAILDCNSKLQNGEAKVSSASNAYGDDIEAEANAYFHQMFSGQLSVDAMVQMLSRYKDSSVQREKSIFDCMIANLFEEYRFFPKYPERQLKIASILFGSVIKHQLISSLTLGMALRLVLDSLRKPADSKMFLFGSKALEQFVNRLVELPQYCNHILQISHLRSTHPELVTVIEQALSRISSGNLESEAVSNPGPSQSFPGNGEFSGSGIGQSALQLPLPVQSQQKNEVHINGNSRVPSVPFIEAKTLLPSSSTTSADVSVIPKNPGISTSSLTSAGFVRPARGATSTRFGSALNIETLVAAAERRENAIETPPSDVQDKISFIINNISTANIESKGKEFAEILPQQYYPWFAQYMVMKRASIEPNFHDLYLKFLDKVDSKLLFKEILQNTYENCKVLLGSELIKSSSEERSLLKNLGSWLGKLTIGRNYVLRAREIDPKSLIVEAYEKGLMIAVIPFTSKVLEPCQNSIAYQPPNPWTMAILGLLAEIYSMPNLKMNLKFDIEVLFKNLGVDLKEVAPTSLLKDRKREIDGNPDFSNKDLGVTHISQPQMIQEPKTISPLKQIDLPLDVADSPNTDASSKLFSQYVAPQRVYTNTLMEDEKVSTLGLSDQLPSPQGLFPSTPSPLFSISQQLSAALPNIGNHVVINQKLSGFAMHFPFHRVVPLAMDRALKEIVSGIVQRSVCIACQTTKELVLKDYTLEPDETRIYNAAHLMVASLAGSLAHVTCKEPLRTSISCHLRNSLQGMNIKNEALEQIVQLVTNDNLDLGCAAIEQAATEKAIQTIDADIDQQLLLRKKHRDGAGSSLFDPNMLSQNSVSFIPESLRPKPGHLSLSQQRVYEDFVQLPWQKQTTQTSHGLSAASSSSGDVGLSSSYGPASGKSASDFLSSAGNARMDNVSRPLDISVEGFESPPVSLLSSQVDPAVDTAGLQFSKSLSTSELSLVESSDTAVKETGASLQTLTSAATMERLGGNNIIQPSLSTRDALEKYHIVTQKMEDLVANIAGDDEIQAVVSEVPEIILRCISRDEAALAVAQKAFKALYDNASSNLHVSANLAILVAVRDVCKRVVKELTSWVIYSEEERKLNKDITIGLIQRELLNLAEYNVHMAKYLDGGRNKSATDFSISLLQSLVTEESSVISELHSLVDALAKLSSKSGSPESLQQLIDIIRNPVTNTSDHSDSAIGIENNDKQSKDKKVVYNTTANIEENTNLEFVESESAGFRIRVSTLFESWYQICEVSGANETACSQYVLHLHETGLLKGDNTTESFFRILLELSVAHCISSEEISSGAVQSPQQAQSPSFLIIDIYAKLVFSILKYLPEQESCSKLFLLSEIMAVTVRSIQKDAEDKKTSLNPRPYFRLFINWLLDLCSLDPGTDGANFQVLSAFASAFHALQPLKFPAFSFAWLELVSHRSFMPKLLTVNGQKGWPYVQRLLVDLLQFLEPFLRNAELGGPVNFLYKGTLRVLLVLLHDFPEFLCDYHFTFCDVIPSSCIQMRNIILSSFPRNMRLPDPSTPNLKIDLLPEIVEAPCILSEVDAALKAKQMKNDVDEYLASRQQNSAYLSELKQKLLLSSSEASSAETRYSVPLINSLVLYTGIQAIQQLQAGETQAQNVVALHMFKYLSMELDTEGRYLFLNAIANQLRYPNNHTHYFSFIMLYLFFESDQEIVQEQITRVLLERLIVNRPHPWGLLITFIELIKNPRYGFWKQAFIRCAPEIEKLFESVARSCGGLKPPDEGMVSGWVSDNSH |